Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855354.1_cds_XP_016512813.1_25420
CDS Infomation

[gene=LOC107829862] [db_xref=GeneID:107829862] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like] [protein_id=XP_016512813.1] [location=join(24642..24675,26343..26643,27421..27520,27627..27893,28002..28079,28171..28272,28371..28420,28541..28640,28887..28976,29069..29182,29391..29520,30034..30437,30973..31056,31366..31386)] [gbkey=CDS]
Sequence

ATGTCGGGTCCATTAGATCGATTTGCGAGGCCTTGCTTTGAGGGGTCGTCCACACATGAT
GAGAGAAGAGAGAGAAAATCTGATTTCGAGAACTCAGAGGATGAGAGGAGGACAAGAATT
GGTTCGCTGAAAAAGAAAGCACTGAATGCATCAACAAAATTTAAACATTCTCTCAAGAAG
AAAGGCAGAAGAAAAAGTGATGGGCGAGTGAGTTCAGTTTCAATTGAGGATATTCGTGAT
GCTGAGGAGCTACAAGCTGTTGACCAATTTAGGCAAGCACTAATTTTGGATGATTTGTTA
CCTGAGAGACATGATGACTACTATATGATGCTAAGGTTTCTGAAAGCAAGAAAGTTTGAT
ATTGATAAAGCAAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGAATTTGGTGCT
GACACCATTATCCATGATTTTCAATTCCAAGAGCAGGATGAAGTTTCGAAATACTATCCC
CAAGGTTATCACGGGATTGATAAGGAGGGAAGACCGGTATACATTGAAAGGCTAGGGAAA
GTTGATCCTAATAAACTTATGCAAGTCACAACAATGGACCGTTACATAAGAAACCATGTA
AGAGAGTTCGAGATAACTTTTGCAATCAAGTTTCCAGCATGTACAGTTGCTGCTAAAAGG
CAGATTGATTCTAGTACCACTATTTTGGACGTCCAGGGAGTGGGTTTGAAGAACTTTAAC
AAGAGTGCAAGAGAGCTCATTGTGCGACTTCAGAAGATTGATGGTGATAATTATCCCGAG
ACACTTCATCAGATGTTTATCATCAATGCTGGACCTGGCTTTAGGCTGCTGTGGAATACT
GTTAAGAGTTTTCTGGATCCCAAGACCACCTCCAAGATACATGTTCTTGGAAACAAGTAC
CAAAACAAATTGCTTGAAATAGTTGATGCTAGTGAGTTGCCAGAGTTTCTGGGTGGAACT
TGTACATGTGCAGATCAAGGAGGTTGCCTTCGTTCAGATAAAGGGCCATGGAAAAATCCG
GAGATACTAAAGATGATTGGTGAAGCACGGCGTGCCAGGCAGGTCGTTAAAGTTGTAAAC
AGTGAAGGCAAGGTAGTTTATGCTAAACCCCGCTTCCCCACGGTAAAAGGTAGTGATACC
TCCACCGCTGAATCGGGATCTGAAGCTGAAGATATTGCTTCCCCTAAAGCTGTAAGGAAT
TATTCCCATCTACGGCTTACTCCTGTTCGTGAAGAGGCTAAGGCTGGAACCTCAGGCTAC
ACTACAAACTTCTCCGGATATGATGAATATGTTCCCATGGTTGACAAGGCGGTTGATTCT
GTGTGGAAGAAACAAACATCCTTTCAAAGAGCTTCCATTTCCAAAGGGATGCTTCCACCA
GCAGATTCTCAGAAGCCCGCAGGTGGTCTTAGTACTCGGATATTGGGACTTCTTCTGGCC
TTCTTCACGACTGTGTTGATGTTTTTCCGTTCAGTGCTATGCCGTGTAACCAAGAAACTT
CCTGATCCATCAAATGGTCAAGACCAAGCAGTTCAAGAATTCACCTCTGATGCAATCAGT
AAAGAGGATTTTCGGCCACCTTCACCAATTCCAGCCTTTACAGAAGCTCAGCTGCTTTCT
GTTGTTCTGAAGAAATTGGGTGAACTTGAGGACAAAGTAAATACACTTCAAGAAAAGCCA
TCTGAGATGCCTTATGAGAAAGAGGAATTGCTAAATGCTGCTGTTTGCCGTGTGGATGCC
CTAGAAGCTGAGTTAATTGCAACCAAGAAGGCTTTGCATGAGGCTTTGATGAGACAAGAG
GAACTTCTTGCGTACATTGACGGTCAAGAAGCTGCGAAAGCTGCAAAGTTTCAGAAAAAG
AAGTTTTGCTTTTAA

Peptide Sequence

PEP ID

XP_016512813.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like [Nicotiana tabacum]
Sequence

MSGPLDRFARPCFEGSSTHDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKK
KGRRKSDGRVSSVSIEDIRDAEELQAVDQFRQALILDDLLPERHDDYYMMLRFLKARKFD
IDKAKHMWADMLQWRKEFGADTIIHDFQFQEQDEVSKYYPQGYHGIDKEGRPVYIERLGK
VDPNKLMQVTTMDRYIRNHVREFEITFAIKFPACTVAAKRQIDSSTTILDVQGVGLKNFN
KSARELIVRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKY
QNKLLEIVDASELPEFLGGTCTCADQGGCLRSDKGPWKNPEILKMIGEARRARQVVKVVN
SEGKVVYAKPRFPTVKGSDTSTAESGSEAEDIASPKAVRNYSHLRLTPVREEAKAGTSGY
TTNFSGYDEYVPMVDKAVDSVWKKQTSFQRASISKGMLPPADSQKPAGGLSTRILGLLLA
FFTTVLMFFRSVLCRVTKKLPDPSNGQDQAVQEFTSDAISKEDFRPPSPIPAFTEAQLLS
VVLKKLGELEDKVNTLQEKPSEMPYEKEELLNAAVCRVDALEAELIATKKALHEALMRQE
ELLAYIDGQEAAKAAKFQKKKFCF

Transcript Sequence

Gene sequence data has not been registered.